Resume

Resume

A web overview of the work history, publications, awards, and selected projects.

Kevin E. Stone

Process Development & Data Science Leader

kevin.stone38@gmail.com · New Jersey · linkedin.com/in/kevinedwardstone · github.com/kstone40 · Google Scholar

Chemical engineer with eleven years at Merck, from small-molecule reaction engineering in the lab to leading process modeling and analytics for biologics. Experimental work in the filings and commercial processes of eight approved medicines.

Experience

Director, Process Modeling & Analytics

2026 - Present

Merck & Co., Inc. · DSCS Digital

  • Managed the team's transition through a department reorganization, guiding 11 colleagues into new roles and welcoming 9 colleagues from elsewhere at Merck as the group refocused on digital solutions for bioprocess drug-substance development
  • Direct five chromatography mechanistic models (MMCEX, flow-through AEX, HIC), cutting wet-lab resources up to 30% and widening process operating ranges up to 50%
  • Advance hybrid neural-ODE upstream modeling that improves experimental efficiency up to 50% in DOE execution and control-strategy definition
  • Roll GARNET workflows out across upstream biologics development so more scientists can build and use the models
  • Build a predictive scale-up toolbox (kLa, pCO2, mixing, mass transfer) to de-risk upstream tech transfer and prevent high-cost engineering-batch failures
  • Deploy analytics dashboards, web applications, and retrieval-based chatbots that scientists use for pipeline decisions

Director, Data-Rich Experimentation

2025 - 2026

Merck & Co., Inc. · PR&D

  • Led a 13-FTE team (plus contractors) spanning biologics high-throughput experimentation, small-molecule catalysis, and process modeling, earning above-benchmark leadership ratings on 13 of 15 dimensions
  • Scaled Bayesian optimization and Algorithmic Process Optimization to 100+ active users and about 50 optimizations per year across 20+ program steps; adoption has since grown to about 200 optimizations per year
  • Developed GARNET, a neural-ODE approach for upstream cell culture and fermentation that produces accurate, data-efficient models from limited experiments
  • Applied GARNET to improve titer 15% and harvest-day viability 20% in a lab proof of concept on a separate pipeline program and reduce process-characterization resources by up to 50%
  • Deployed a hybrid-model digital shadow at a biologics manufacturing site, supporting deviation analysis, troubleshooting, and real-time plant decisions
  • Grew chromatography mechanistic modeling from 1-2 to more than 5 models per year, from pre-FIH design through process characterization and tech transfer
  • Received the ACS GCI Pharmaceutical Roundtable Data Science & Modeling for Green Chemistry award (2025) for applying APO to more resource-efficient laboratory experimentation and manufacturing processes

Associate Principal Scientist → Principal Scientist

2022 - 2025

Merck & Co., Inc. · PR&D Data-Rich Experimentation

  • Founded Algorithmic Process Optimization (APO), onboarding 57 active users through an interactive "OptiThon" hackathon and SME office hours across 9 campaigns in small- and large-molecule modalities
  • Authored and published obsidian, PR&D's first open-source codebase, for Bayesian optimization in process and materials research on BoTorch/GPyTorch
  • Brought Bayesian optimization to mRNA in-vitro transcription, more than doubling the combined yield-and-purity objective across 11 parameters in 42 reactions; campaigns used 25-75% fewer wet-lab resources
  • Developed neural-ODE deep-learning models (GARNET) for data-efficient bioreactor cell-culture modeling
  • Served as the only research scientist on the 40-FTE DRE Leadership Team and received a 2024 ACS Division of Organic Chemistry Technical Achievement award

Senior Scientist, Reaction Engineering

2019 - 2022

Merck & Co., Inc. · CERD Reaction Engineering Lab

  • Redesigned the molnupiravir API-forming reaction in a 4-week campaign, achieving more than a 5x stability window, higher yield, and an order-of-magnitude lower impurity load, supporting pandemic-era COVID-antiviral supply
  • Established Merck's synthetic-electrochemistry engineering strategy and scaled an electrochemical oxidation to kilograms (OPRD Outstanding Publication of the Year, 2022)
  • Elucidated the islatravir kinase yield-loss mechanism, redirecting the team to a higher-yield immobilized-enzyme process proven at kilogram scale
  • Built in-silico nitrosamine risk-assessment tools covering 12 commercial products, saving more than $1.5M in CRO testing (Merck MS&T Innovation Award runner-up, 2021)
  • Published five papers in 2021 while starting a Georgia Tech M.S. in Analytics (completed 2023)

Associate Scientist → Scientist

2015 - 2019

Merck & Co., Inc. · Chemical Engineering Research & Development

  • Technical lead for multiple doravirine synthetic steps through development, tech transfer, filing, and launch (Delstrigo and Pifeltro)
  • Authored 150+ pages of process-development reports and co-authored CMC sections (S.2.2, S.2.6) supporting the doravirine NDA filing
  • Supervised the 6-week commercial PPQ campaign in Ballydine, Ireland, correcting critical operational issues and delivering 700+ kg of quality and clinical-supply API across campaigns
  • Two-time CERD Technical Achievement Award recipient (2015, 2016)

Education

M.S., Analytics

2023

Georgia Institute of Technology · Machine learning and computational data analytics

B.S., Chemical Engineering

2015

University of Delaware · Minors: Materials Science, Chemistry, Biomechanical & Biochemical Engineering

Skills

Leadership

Coaching and developing scientists, cross-functional team-building, digital transformation, vendor and partner management, enterprise software deployment

Digital & Modeling

In-silico process optimization, dynamic systems modeling, Python (expert), R/C#/MATLAB/SQL/JMP/Minitab, PyTorch/GPyTorch/BoTorch, scikit-learn, Pandas/Plotly/Dash, gPROMS/DynoChem, ANSYS Fluent

Functional & Laboratory

Benchtop synthetic chemistry, DoE and Bayesian optimization, scale-up and tech transfer, reaction engineering, HTE, PAT (FTIR/Raman/flow-NMR), chromatography, cell culture, electrochemistry, biocatalysis

Selected Publications

  • J. Am. Chem. Soc. · Electrochemical recycling of ATP in biocatalytic cascades · 2022
  • Org. Process Res. Dev. · Kilo-scale electrochemical oxidation: a workflow for scaling electrosynthesis · 2022
  • Biochemistry · Algorithmic optimization of in-vitro transcription for mRNA vaccines · 2024
  • Org. Process Res. Dev. · Data-rich, parallelized kinetic analysis for process optimization · 2026

14 peer-reviewed publications, 500+ citations, h-index 12. Full list and live citation counts at kevinstone.io/research.

Awards

  • ACS GCI Pharmaceutical Roundtable, Data Science & Modeling 2025
  • ACS Division of Organic Chemistry, Technical Achievements 2024
  • OPRD Outstanding Publication of the Year 2022
  • Merck MS&T Innovation Award, runner-up 2021
  • ACS & EPA Green Chemistry Awards (doravirine, gefapixant, molnupiravir) 2018-22
  • Merck CERD Technical Achievement Award 2015-16

Open Source

obsidian · Creator & maintainer · Open-source Python library for algorithmic process optimization and AI experiment design (Bayesian optimization, BoTorch) · github.com/MSDLLCpapers/obsidian